PlantPAN 4.0: updated database for identifying conserved non-coding sequences and exploring dynamic transcriptional regulation in plant promoters
C.N. Chow, C. W. Yang, N. Y. Wu, H. T. Wang, K. C. Tseng, Y. H. Chiu, T. Y. Lee and W.C. Chang*
Nucleic Acids Research
2023-06
期刊論文
JustRNA: a database of plant long noncoding RNA expression profiles and functional network
K. C. Tseng, N. Y. Wu, C. N. Chow, H. Q. Zheng, C. Y. Chou, C. W. Yang, M. J. Wang, S. B. Chang and W. C. Chang*
Journal of Experimental Botany
2023-03
期刊論文
Databases and prospects of dynamic gene regulation in eukaryotes: A mini review
C. N. Chow, C. W. Yang, and W. C. Chang*
Computational and Structural Biotechnology Journal
2023-01
專書論文
Chapter 9: Plant Cis-elements and Transcription Factors
C. N. Chow, K. C.Tseng and W. C. Chang
Plant Omics: Advances in Big Data Biology
2023-01
專書論文
Database for plant transcription factor binding sites
W. C. Chang and C. N. Chow
Transcription Factor Regulatory Networks
2022-09
期刊論文
Mysteries of gene regulation: Promoters are not the sole triggers of gene expression
C. N. Chow, K. C. Tseng, P. F. Hou, N. Y. Wu, T. Y. Lee, and W.C. Chang
Computational and Structural Biotechnology Journal
2022-01
期刊論文
dbPTM in 2022: an updated database for exploring regulatory networks and functional associations of protein post-translational modifications
Z.Li, S. Li, M. Luo, J.H. Jhong, W. Li, L. Yao, Y. Pang, Z. Wang, R. Wang, R. Ma, J. Yu, Y. Huang, X. Zhu, Q. Cheng, H. Feng, J. Zheng, C. Wang, J. B.K. Ksu, W.C. Chang, F.X. Wei, H.D. Huang, T.Y. Lee
Nucleic Acids Research
2021-08
期刊論文
Exploring the Multifunctional Roles of Odontoglossum Ringspot Virus P126 in Facilitating Cymbidium Mosaic Virus
Cell-to-Cell Movement during Mixed Infection
S.C. Lee, H. P, Y.W. Huang, M.H. He, Y.L. Song, S.Y. Kuo, W.C. Chang, Y.H. Hsu, and N.S. Lin
Viruses
2020-06
期刊論文
EXPath 2.0: An Updated Database for Integrating High-Throughput Gene Expression Data with Biological Pathways
microRPM: A microRNA Prediction Model based only on plant small RNA sequencing data
K. C. Tseng, Y. F. Chiang-Hsieh, H. Pai, C. N. Chow, S. C. Lee, H. Q. Zheng,P. L. Kuo, G. Z. Li, Y. C. Hung, N. S. Lin and W. C. Chang*
Bioinformatics
2017-08
期刊論文
EXPath tool-a system for comprehensively analyzing regulatory pathways and coexpression networks from high-throughput transcriptome data
H. Q. Zheng, N. Y. Wu, C. N. Chow, K. C. Tseng, C. H. Chien, Y. C. Hung, G. Z. Li, and W. C. Chang*
DNA Research
2017-03
期刊論文
Common Stress Transcriptome Analysis Reveals Functional and Genomic Architecture Differences Between Early and Delayed Response Genes
C. W. Lin, L. Y. Huang, C. L. Huang, Y. C. Wang, P. H. Lai, H. V. Wang, W. C. Chang, T. Y. Chiang, and H. J. Huang*
Plant and Cell Physiology
2016-06
期刊論文
Comparative transcriptome analysis reveals a potential photosynthate partitioning mechanism between lipid and starch biosynthetic pathways in green microalgae
W. C. Chang, H. Q. Zheng, and C. N. N. Chen*
Algal Research-Biomass Biofuels and Bioproducts
2016-01
期刊論文
PlantPAN 2.0: an update of Plant Promoter Analysis Navigator for reconstructing transcriptional regulatory networks in plants
C.N. Chow, H.Q. Zheng, N.Y. Wu, C.H. Chien, H.D. Huang, T.Y. Lee, Y.F. Chiang-Hsieh, P.F. Hou, T.Y. Yang, and W. C. Chang*
Nucleic Acids Research
2015-05
期刊論文
AtmiRNET: a web-based resource for reconstructing regulatory networks of Arabidopsis microRNAs
C. H. Chien, Y. F. Chiang-Hsieh, Y. A. Chen, C. N. Chow, N. Y. Wu, P. F. Hou, W. C. Chang*
Database (Oxford)
2015-01
期刊論文
EXPath: a database of comparative expression analysis inferring metabolic pathways for plants